1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G10610

AT4G10610 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : CTC-interacting domain 12


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00219700 CID9,... Polyadenylate-binding protein-interacting protein 11... 0.03 OrthoFinder output from all 47 species
Adi_g025631 CID11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116982 CID10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117217 CID11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35193 CID12, ATRBP37, RBP37 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.5 CID13 No description available 0.01 OrthoFinder output from all 47 species
Dde_g10301 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g35030.3 CID8, LOC_Os06g35030 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
MA_4300g0010 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 12... 0.06 OrthoFinder output from all 47 species
Smo56081 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
Zm00001e037115_P002 CID10, Zm00001e037115 Polyadenylate-binding protein-interacting protein 11... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IDA Interproscan
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 249 313
IPR000504 RRM_dom 152 214
IPR009818 Ataxin-2_C 74 87
No external refs found!