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  5. AT4G08350

AT4G08350 (GTA02, GTA2)


Aliases : GTA02, GTA2

Description : global transcription factor group A2


Gene families : OG0002736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G08350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00250180 GTA02, GTA2,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00251130 SPT5L, KTF1,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Adi_g020093 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ala_g11309 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
Aob_g14168 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ceric.26G072300.1 GTA02, GTA2,... component *(SPT5) of SPT4/5 transcription elongation... 0.05 OrthoFinder output from all 47 species
Cre01.g031050 GTA02, GTA2 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g08962 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
GSVIVT01010022001 GTA02, GTA2 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01016203001 SPT5L, KTF1 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Gb_37075 GTA02, GTA2 RNA polymerase-V auxiliary factor (KTF1/SPT5L).... 0.05 OrthoFinder output from all 47 species
Len_g12137 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
Lfl_g05703 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.04 OrthoFinder output from all 47 species
Msp_g23875 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.04 OrthoFinder output from all 47 species
Ppi_g52300 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.04 OrthoFinder output from all 47 species
Sam_g37710 No alias component *(SPT5) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
Smo96727 GTA02, GTA2 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Solyc04g064700.4.1 GTA02, GTA2,... component SPT5 of SPT4/5 transcription elongation factor complex 0.06 OrthoFinder output from all 47 species
Solyc11g008150.3.1 SPT5L, KTF1,... RNA polymerase-V auxiliary factor (KTF1/SPT5L) 0.03 OrthoFinder output from all 47 species
Tin_g41245 GTA02, GTA2 component *(SF3B2) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000266 mitochondrial fission IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006482 protein demethylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008214 protein dealkylation IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015491 obsolete cation:cation antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016577 histone demethylation IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033169 histone H3-K9 demethylation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0035101 FACT complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044375 regulation of peroxisome size IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP HCCA
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070076 histone lysine demethylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070988 demethylation IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR005824 KOW 480 522
IPR022581 Spt5_N 90 177
IPR005100 NGN-domain 183 265
No external refs found!