AT4G03450

Description : Ankyrin repeat family protein

Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G03450
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AT4G03480	No alias	Ankyrin repeat family protein	0.03	OrthoFinder output from all 47 species
AT4G03490	No alias	Ankyrin repeat family protein	0.03	OrthoFinder output from all 47 species
AT4G14390	No alias	Ankyrin repeat family protein	0.08	OrthoFinder output from all 47 species
Aob_g31033	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01020517001	No alias	Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01020519001	No alias	Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_00335	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_09218	No alias	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_26468	No alias	Ankyrin repeat-containing protein At5g02620...	0.01	OrthoFinder output from all 47 species
Gb_26482	No alias	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os07g29940.1	LOC_Os07g29940	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os11g09260.1	LOC_Os11g09260	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os11g14630.1	LOC_Os11g14630	Ankyrin repeat-containing protein At2g01680...	0.05	OrthoFinder output from all 47 species
LOC_Os11g15460.1	LOC_Os11g15460	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Lfl_g22109	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g055970.4.1	Solyc05g055970	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e012087_P001	Zm00001e012087	Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0002237	response to molecule of bacterial origin	RCA	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009581	detection of external stimulus	RCA	Interproscan
BP	GO:0009595	detection of biotic stimulus	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	RCA	Interproscan
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0004385	guanylate kinase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010225	response to UV-C	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010421	hydrogen peroxide-mediated programmed cell death	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016143	S-glycoside metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0036473	cell death in response to oxidative stress	IEP	HCCA
BP	GO:0036474	cell death in response to hydrogen peroxide	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0042343	indole glucosinolate metabolic process	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
MF	GO:0043295	glutathione binding	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
MF	GO:0045431	flavonol synthase activity	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0072341	modified amino acid binding	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0097243	flavonoid binding	IEP	HCCA
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1900750	oligopeptide binding	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
MF	GO:2001147	camalexin binding	IEP	HCCA
MF	GO:2001227	quercitrin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020683	DUF3447	149	208
IPR020683	DUF3447	295	383
IPR026961	PGG_dom	455	563

External Links

No external refs found!

AT4G03450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation