AT4G02480

Description : AAA-type ATPase family protein

Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02480
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Adi_g098877	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g100776	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20700	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g17601	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g28238	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G049600.1	Ceric.14G049600	not classified & original description: pacid=50633231...	0.03	OrthoFinder output from all 47 species
Ceric.1Z097100.1	Ceric.1Z097100	not classified & original description: pacid=50640984...	0.03	OrthoFinder output from all 47 species
Dcu_g31555	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05018	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01027983001	No alias	ATPase family AAA domain-containing protein FIGL1...	0.04	OrthoFinder output from all 47 species
Gb_03981	No alias	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Lfl_g09487	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g48935	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g08137	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g08941	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63738	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g29682	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	None	Extended
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	RCA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005245	voltage-gated calcium channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005262	calcium channel activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0010025	wax biosynthetic process	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010143	cutin biosynthetic process	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
BP	GO:0032527	protein exit from endoplasmic reticulum	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	HCCA
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0032952	regulation of (1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0032953	regulation of (1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	HCCA
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1900490	obsolete positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	1001	1130

External Links

No external refs found!

AT4G02480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation