AT4G01395


No description available


Gene families : OG0005140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005140_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01395

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00104770 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.COG... 0.04 OrthoFinder output from all 47 species
Adi_g013037 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Ala_g13874 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Als_g01120 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Aob_g02206 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Ceric.05G064400.1 Ceric.05G064400 component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Cre06.g287250 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 OrthoFinder output from all 47 species
Gb_28100 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.05 OrthoFinder output from all 47 species
Lfl_g02138 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
MA_90828g0010 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species
Mp8g14900.1 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.06 OrthoFinder output from all 47 species
Pir_g11780 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019909 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Smo230075 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 OrthoFinder output from all 47 species
Solyc07g056010.3.1 Solyc07g056010 component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species
Spa_g00464 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Tin_g01158 No alias component *(COG4) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Zm00001e000525_P002 Zm00001e000525 component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004839 ubiquitin activating enzyme activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!