AT3G62830 (AUD1, UXS2, ATUXS2)

Aliases : AUD1, UXS2, ATUXS2

Description : NAD(P)-binding Rossmann-fold superfamily protein

Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62830

Target	Alias	Description	ECC score	Gene Family Method
Aev_g43939	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12226	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g00824	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05597	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
MA_7855g0010	UXS5	UDP-D-glucuronic acid decarboxylase	0.02	OrthoFinder output from all 47 species
Msp_g09979	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g06255	ATUXS3, UXS3	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g066700.4.1	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species
Spa_g12500	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e031428_P001	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008460	dTDP-glucose 4,6-dehydratase activity	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	ISS	Interproscan
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	TAS	Interproscan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019305	dTDP-rhamnose biosynthetic process	ISS	Interproscan
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042732	D-xylose metabolic process	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046383	dTDP-rhamnose metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IDA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
BP	GO:0006617	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
MF	GO:0080031	methyl salicylate esterase activity	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016040	NAD(P)-bd_dom	123	415

External Links

No external refs found!

AT3G62830 (AUD1, UXS2, ATUXS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation