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  5. AT3G62260

AT3G62260


Description : Protein phosphatase 2C family protein


Gene families : OG0000632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62260
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.06 OrthoFinder output from all 47 species
Adi_g004494 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019085 No alias clade G phosphatase *(DBP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023836 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057511 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065482 AtDBP1, DBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23337 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51622 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16830 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07787 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05677.t1 AtDBP1, DBP1,... clade G phosphatase *(DBP) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0009.g011842 No alias clade G phosphatase *(DBP) & original description: CDS=403-1362 0.04 OrthoFinder output from all 47 species
Azfi_s3252.g115111 No alias clade G phosphatase *(DBP) & original description: CDS=374-1630 0.03 OrthoFinder output from all 47 species
Ceric.09G079600.1 AtDBP1, DBP1,... clade G phosphatase *(DBP) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.28G001400.1 AtDBP1, DBP1,... clade G phosphatase *(DBP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g45651 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19762 No alias clade G phosphatase *(DBP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09598 No alias clade G phosphatase *(DBP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.07 OrthoFinder output from all 47 species
Gb_16142 No alias transcription factor (DBP). clade G phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os01g19130.1 LOC_Os01g19130 transcription factor (DBP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g04360.1 LOC_Os05g04360 transcription factor (DBP) 0.02 OrthoFinder output from all 47 species
Len_g08148 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.1 OrthoFinder output from all 47 species
Len_g55507 No alias clade G phosphatase *(DBP) & original description: none 0.05 OrthoFinder output from all 47 species
MA_16483g0010 No alias transcription factor (DBP) 0.03 OrthoFinder output from all 47 species
Mp6g03430.1 AtDBP1, DBP1 transcription factor (DBP) 0.03 OrthoFinder output from all 47 species
Msp_g19202 No alias clade G phosphatase *(DBP) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09163 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03229 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45038 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09780 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo102683 AtDBP1, DBP1 RNA biosynthesis.transcriptional activation.DBP... 0.03 OrthoFinder output from all 47 species
Solyc01g068000.4.1 Solyc01g068000 transcription factor (DBP) 0.11 OrthoFinder output from all 47 species
Solyc06g009390.3.1 Solyc06g009390 transcription factor (DBP) 0.03 OrthoFinder output from all 47 species
Spa_g22865 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g24550 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g46551 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g54548 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57303 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e025432_P001 Zm00001e025432 transcription factor (DBP) 0.11 OrthoFinder output from all 47 species
Zm00001e040337_P001 Zm00001e040337 transcription factor (DBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004722 protein serine/threonine phosphatase activity ISS Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0010200 response to chitin RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071323 cellular response to chitin IEP HCCA
BP GO:0071417 cellular response to organonitrogen compound IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 87 340
No external refs found!