AT3G60320

Description : Protein of unknown function (DUF630 and DUF632)

Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G60320
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00120840	evm_27.TU.AmTr_v1...	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Ala_g25168	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06341	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10785	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g17913	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g07681	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene09722.t1	Aspi01Gene09722	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25833.t2	Aspi01Gene25833	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g01214	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G022700.1	Ceric.17G022700	not classified & original description: pacid=50618371...	0.02	OrthoFinder output from all 47 species
Ceric.37G008500.1	Ceric.37G008500	not classified & original description: pacid=50616831...	0.03	OrthoFinder output from all 47 species
Ceric.39G055100.1	Ceric.39G055100	not classified & original description: pacid=50582665...	0.03	OrthoFinder output from all 47 species
Dac_g02345	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g13217	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07102	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12833	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07902	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09156	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01018276001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
GSVIVT01035712001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os03g20530.1	LOC_Os03g20530	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Lfl_g16693	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01272	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03816	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09766	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18726	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g22395	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38928	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g24378	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17348	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758	No alias	not classified & original description: CDS=148-2271	0.03	OrthoFinder output from all 47 species
Solyc01g090270.4.1	Solyc01g090270	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc09g007100.3.1	Solyc09g007100	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Tin_g03471	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21476	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037852_P002	Zm00001e037852	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007020	microtubule nucleation	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
CC	GO:0000325	plant-type vacuole	IEP	HCCA
MF	GO:0005388	P-type calcium transporter activity	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0006882	cellular zinc ion homeostasis	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0009624	response to nematode	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055069	zinc ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055081	monoatomic anion homeostasis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006867	DUF632	357	662
IPR006868	DUF630	1	59

External Links

No external refs found!

AT3G60320

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation