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Description : BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G59460 | |
| Cluster | HCCA: Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G44180 | No alias | syntaxin-related family protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005345 | purine nucleobase transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005451 | obsolete monoatomic cation:proton antiporter activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006814 | sodium ion transport | IEP | HCCA |
| CC | GO:0012505 | endomembrane system | IEP | HCCA |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015205 | nucleobase transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015385 | sodium:proton antiporter activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0035725 | sodium ion transmembrane transport | IEP | HCCA |
| CC | GO:0042995 | cell projection | IEP | HCCA |
| MF | GO:0051139 | metal cation:proton antiporter activity | IEP | HCCA |
| CC | GO:0090406 | pollen tube | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
| MF | GO:0140828 | metal cation:monoatomic cation antiporter activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |