AT3G58500 (PP2A-4)

Aliases : PP2A-4

Description : protein phosphatase 2A-4

Gene families : OG0000824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000824_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G58500

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00133p00104740	PP2A-4,...	Protein modification.dephosphorylation.serine/threonine...	0.04	OrthoFinder output from all 47 species
AT2G42500	PP2A-3	protein phosphatase 2A-3	0.02	OrthoFinder output from all 47 species
Adi_g040835	PP2A-4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Adi_g076745	PP2A-4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aev_g04671	PP2A-2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Als_g02459	PPX1, PPX-1	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g02159	PP2A-2	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0552.g076626	PP2A-4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Cre03.g199983	PP2A-1	Protein modification.dephosphorylation.serine/threonine...	0.02	OrthoFinder output from all 47 species
Dcu_g13034	PPX1, PPX-1	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Ehy_g14285	PP2A-4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01001347001	PP2A-4	Protein modification.dephosphorylation.serine/threonine...	0.06	OrthoFinder output from all 47 species
LOC_Os02g12580.1	PP2A-2, LOC_Os02g12580	catalytic component PP2A-phosphatase of TON1-TRM-PP2A...	0.03	OrthoFinder output from all 47 species
Len_g02265	PPX1, PPX-1	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
Len_g11549	PP2A-2	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Pir_g03365	PP2A-4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sam_g28874	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Solyc01g011340.3.1	PP2A-2, Solyc01g011340	catalytic component PP2A-phosphatase of TON1-TRM-PP2A...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	TAS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	None	Extended
MF	GO:0004722	protein serine/threonine phosphatase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006470	protein dephosphorylation	TAS	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0008287	protein serine/threonine phosphatase complex	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1903293	phosphatase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000322	storage vacuole	IEP	HCCA
CC	GO:0000325	plant-type vacuole	IEP	HCCA
CC	GO:0000326	protein storage vacuole	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0000919	cell plate assembly	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004470	malic enzyme activity	IEP	HCCA
MF	GO:0004473	malate dehydrogenase (decarboxylating) (NADP+) activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006108	malate metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
BP	GO:0006898	receptor-mediated endocytosis	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010091	trichome branching	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010222	stem vascular tissue pattern formation	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
CC	GO:0016607	nuclear speck	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016652	oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
CC	GO:0030135	coated vesicle	IEP	HCCA
CC	GO:0030136	clathrin-coated vesicle	IEP	HCCA
CC	GO:0030139	endocytic vesicle	IEP	HCCA
CC	GO:0030176	obsolete integral component of endoplasmic reticulum membrane	IEP	HCCA
MF	GO:0030276	clathrin binding	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0032880	regulation of protein localization	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0042285	xylosyltransferase activity	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
CC	GO:0045334	clathrin-coated endocytic vesicle	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0051262	protein tetramerization	IEP	HCCA
BP	GO:0051289	protein homotetramerization	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0060341	regulation of cellular localization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072583	clathrin-dependent endocytosis	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901402	negative regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:1901464	negative regulation of tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1902325	negative regulation of chlorophyll biosynthetic process	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004843	Calcineurin-like_PHP_ApaH	55	246

External Links

No external refs found!

AT3G58500 (PP2A-4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation