AT3G55605

Description : Mitochondrial glycoprotein family protein

Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G55605
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00104470	evm_27.TU.AmTr_v1...	Uncharacterized protein At2g39795, mitochondrial...	0.05	OrthoFinder output from all 47 species
AMTR_s00012p00263410	evm_27.TU.AmTr_v1...	Uncharacterized protein At2g39795, mitochondrial...	0.05	OrthoFinder output from all 47 species
Adi_g077568	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g114006	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g15202	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g10589	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00353	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00459	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene62090.t1	Aspi01Gene62090	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62093.t1	Aspi01Gene62093	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010000	No alias	not classified & original description: CDS=138-950	0.03	OrthoFinder output from all 47 species
Azfi_s0185.g056596	No alias	not classified & original description: CDS=77-799	0.03	OrthoFinder output from all 47 species
Azfi_s0197.g057340	No alias	not classified & original description: CDS=175-993	0.03	OrthoFinder output from all 47 species
Cba_g25289	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G126700.1	Ceric.01G126700	not classified & original description: pacid=50591892...	0.03	OrthoFinder output from all 47 species
Ceric.06G023100.1	Ceric.06G023100	not classified & original description: pacid=50619513...	0.08	OrthoFinder output from all 47 species
Ceric.10G002400.1	Ceric.10G002400	not classified & original description: pacid=50611676...	0.12	OrthoFinder output from all 47 species
Dac_g41117	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016468001	No alias	Uncharacterized protein At2g39795, mitochondrial...	0.08	OrthoFinder output from all 47 species
GSVIVT01017565001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_27592	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_30186	No alias	Uncharacterized protein At2g39795, mitochondrial...	0.05	OrthoFinder output from all 47 species
LOC_Os01g05010.1	LOC_Os01g05010	Uncharacterized protein At2g39795, mitochondrial...	0.1	OrthoFinder output from all 47 species
LOC_Os06g22070.1	LOC_Os06g22070	Uncharacterized protein At2g39795, mitochondrial...	0.08	OrthoFinder output from all 47 species
LOC_Os08g34130.1	LOC_Os08g34130	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Len_g04606	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15788	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g00853	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08735	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427007g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_123491g0010	No alias	Uncharacterized protein At2g39795, mitochondrial...	0.09	OrthoFinder output from all 47 species
MA_5294g0010	No alias	Uncharacterized protein At2g39795, mitochondrial...	0.06	OrthoFinder output from all 47 species
Nbi_g00567	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g01706	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g03427	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g09249	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g61266	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c12_23320V3.1	Pp3c12_23320	Mitochondrial glycoprotein family protein	0.02	OrthoFinder output from all 47 species
Sam_g10107	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g11538	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11539	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17949	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g35293	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g079930.3.1	Solyc03g079930	Uncharacterized protein At2g39795, mitochondrial...	0.05	OrthoFinder output from all 47 species
Solyc03g117080.4.1	Solyc03g117080	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Solyc06g065800.3.1	Solyc06g065800	no hits & (original description: none)	0.1	OrthoFinder output from all 47 species
Spa_g01691	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g09185	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g06431	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e016932_P001	Zm00001e016932	Uncharacterized protein At2g39795, mitochondrial...	0.06	OrthoFinder output from all 47 species
Zm00001e036951_P001	Zm00001e036951	Uncharacterized protein At2g39795, mitochondrial...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005759	mitochondrial matrix	ISS	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006626	protein targeting to mitochondrion	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009560	embryo sac egg cell differentiation	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034968	histone lysine methylation	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000373	Group II intron splicing	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004774	succinate-CoA ligase activity	IEP	HCCA
MF	GO:0004776	succinate-CoA ligase (GDP-forming) activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	HCCA
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0010030	positive regulation of seed germination	IEP	HCCA
MF	GO:0015450	protein-transporting ATPase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
MF	GO:0016018	cyclosporin A binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018195	peptidyl-arginine modification	IEP	HCCA
BP	GO:0018216	peptidyl-arginine methylation	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
BP	GO:0032870	cellular response to hormone stimulus	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034969	histone arginine methylation	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043985	histone H4-R3 methylation	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0071396	cellular response to lipid	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003428	MAM33	71	256

External Links

No external refs found!

AT3G55605

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation