AT3G55470

Description : Calcium-dependent lipid-binding (CaLB domain) family protein

Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G55470

Target	Alias	Description	ECC score	Gene Family Method
Adi_g043199	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g043200	NTMC2T5.1, NTMC2TYPE5.1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g50402	SRC2, (AT)SRC2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08754	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g30822	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene48943.t1	NTMC2T5.1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001278.10	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020816.3	No alias	Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica	0.02	OrthoFinder output from all 47 species
Dde_g05597	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14898	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01034164001	No alias	Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica	0.06	OrthoFinder output from all 47 species
LOC_Os01g62430.1	LOC_Os01g62430	Elicitor-responsive protein 1 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os04g44870.1	LOC_Os04g44870	Elicitor-responsive protein 3 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os04g58570.1	LOC_Os04g58570	Elicitor-responsive protein 3 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
MA_16469g0010	No alias	Elicitor-responsive protein 3 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Mp4g14560.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g20065	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g04941	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g34784	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41118	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06166	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15651	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01822	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g55891	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07436	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g15133	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18838	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36601	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36632	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39179	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g018050.2.1	Solyc10g018050	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Solyc10g018060.2.1	Solyc10g018060	no description available(sp\|q9c8s6\|pp16b_arath : 158.0)	0.03	OrthoFinder output from all 47 species
Spa_g09706	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007429_P002	Zm00001e007429	Elicitor-responsive protein 3 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0000919	cell plate assembly	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000008	C2_dom	4	107

External Links

No external refs found!

AT3G55470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation