AT3G55010 (ATPURM, PUR5)

Aliases : ATPURM, PUR5

Description : phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)

Gene families : OG0005193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005193_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G55010

Target	Alias	Description	ECC score	Gene Family Method
Ceric.10G015700.1	ATPURM, PUR5,...	aminoimidazole RN synthetase *(PUR5) & original...	0.05	OrthoFinder output from all 47 species
Dac_g32631	ATPURM, PUR5	aminoimidazole RN synthetase *(PUR5) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01028086001	ATPURM, PUR5	Nucleotide metabolism.purines.ribonucleotide (RN)...	0.03	OrthoFinder output from all 47 species
Gb_36051	ATPURM, PUR5	aminoimidazole RN synthase	0.03	OrthoFinder output from all 47 species
LOC_Os03g61600.1	ATPURM, PUR5,...	aminoimidazole RN synthase	0.04	OrthoFinder output from all 47 species
Mp7g12650.1	ATPURM, PUR5	aminoimidazole RN synthase	0.06	OrthoFinder output from all 47 species
Nbi_g05778	ATPURM, PUR5	aminoimidazole RN synthetase *(PUR5) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g66662	ATPURM, PUR5	aminoimidazole RN synthetase *(PUR5) & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c6_25750V3.1	ATPURM, PUR5, Pp3c6_25750	phosphoribosylformylglycinamidine cyclo-ligase,...	0.02	OrthoFinder output from all 47 species
Ppi_g02001	ATPURM, PUR5	aminoimidazole RN synthetase *(PUR5) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18006	No alias	aminoimidazole RN synthetase *(PUR5) & original description: none	0.03	OrthoFinder output from all 47 species
Smo92321	ATPURM, PUR5	Nucleotide metabolism.purines.ribonucleotide (RN)...	0.02	OrthoFinder output from all 47 species
Zm00001e031296_P001	ATPURM, PUR5,...	aminoimidazole RN synthase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004641	phosphoribosylformylglycinamidine cyclo-ligase activity	IGI	Interproscan
MF	GO:0004641	phosphoribosylformylglycinamidine cyclo-ligase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
MF	GO:0005524	ATP binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	IGI	Interproscan
BP	GO:0006164	purine nucleotide biosynthetic process	RCA	Interproscan
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006743	ubiquinone metabolic process	None	Extended
BP	GO:0006744	ubiquinone biosynthetic process	RCA	Interproscan
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016882	cyclo-ligase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042181	ketone biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901661	quinone metabolic process	None	Extended
BP	GO:1901663	quinone biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000469	cleavage involved in rRNA processing	IEP	HCCA
BP	GO:0000478	endonucleolytic cleavage involved in rRNA processing	IEP	HCCA
BP	GO:0000741	karyogamy	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006553	lysine metabolic process	IEP	HCCA
BP	GO:0006954	inflammatory response	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0008836	diaminopimelate decarboxylase activity	IEP	HCCA
BP	GO:0009085	lysine biosynthetic process	IEP	HCCA
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016273	arginine N-methyltransferase activity	IEP	HCCA
MF	GO:0016274	protein-arginine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032870	cellular response to hormone stimulus	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0046451	diaminopimelate metabolic process	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0071310	cellular response to organic substance	IEP	HCCA
BP	GO:0071396	cellular response to lipid	IEP	HCCA
BP	GO:0071495	cellular response to endogenous stimulus	IEP	HCCA
BP	GO:0080056	petal vascular tissue pattern formation	IEP	HCCA
BP	GO:0080057	sepal vascular tissue pattern formation	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016188	PurM-like_N	104	210
IPR010918	PurM-like_C_dom	223	387

External Links

No external refs found!

AT3G55010 (ATPURM, PUR5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation