1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G54070

AT3G54070


Description : Ankyrin repeat family protein


Gene families : OG0003966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54070
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270930 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00087520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00090550 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G18670 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01001211001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001892001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01003106001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01011198001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01011219001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01023767001 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g068600.3.1 Solyc02g068600 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc02g068670.3.1 Solyc02g068670 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g041340.2.1 Solyc05g041340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g041440.4.1 Solyc05g041440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g041590.4.1 Solyc05g041590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g098390.3.1 Solyc12g098390 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 399 516
IPR020683 DUF3447 89 177
No external refs found!