AT3G53520 (UXS1, ATUXS1)

Aliases : UXS1, ATUXS1

Description : UDP-glucuronic acid decarboxylase 1

Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53520
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022119	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g02095	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g02174	UXS5	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g05015	UXS5	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g42489	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00514	UXS6	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00559	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43402.t1	AUD1, UXS2,...	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03666	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025597001	UXS1, ATUXS1	Carbohydrate metabolism.nucleotide sugar...	0.04	OrthoFinder output from all 47 species
Gb_12900	AUD1, UXS2, ATUXS2	UDP-D-glucuronic acid decarboxylase	0.04	OrthoFinder output from all 47 species
LOC_Os01g62020.1	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os03g16980.1	UXS6, LOC_Os03g16980	UDP-D-glucuronic acid decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g01759	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
MA_174294g0010	UXS5	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species
Mp2g19470.1	UXS5	UDP-D-glucuronic acid decarboxylase	0.05	OrthoFinder output from all 47 species
Msp_g03130	UXS5	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g06332	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02082	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g27692	UXS6	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11590	ATUXS3, UXS3	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_11740V3.1	AUD1, UXS2,...	NAD(P)-binding Rossmann-fold superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c14_15630V3.1	AUD1, UXS2,...	NAD(P)-binding Rossmann-fold superfamily protein	0.01	OrthoFinder output from all 47 species
Ppi_g06255	ATUXS3, UXS3	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000237	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: CDS=1-1446	0.05	OrthoFinder output from all 47 species
Smo267191	AUD1, UXS2, ATUXS2	Carbohydrate metabolism.nucleotide sugar...	0.03	OrthoFinder output from all 47 species
Smo267587	AUD1, UXS2, ATUXS2	Carbohydrate metabolism.nucleotide sugar...	0.06	OrthoFinder output from all 47 species
Solyc01g066700.4.1	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.04	OrthoFinder output from all 47 species
Solyc12g099480.2.1	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.04	OrthoFinder output from all 47 species
Spa_g15408	AUD1, UXS2, ATUXS2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001241_P001	UXS5, Zm00001e001241	UDP-D-glucuronic acid decarboxylase	0.06	OrthoFinder output from all 47 species
Zm00001e019359_P001	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species
Zm00001e028786_P001	AUD1, UXS2,...	UDP-D-glucuronic acid decarboxylase	0.03	OrthoFinder output from all 47 species
Zm00001e038475_P001	UXS6, Zm00001e038475	UDP-D-glucuronic acid decarboxylase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
CC	GO:0016020	membrane	TAS	Interproscan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042732	D-xylose metabolic process	IDA	Interproscan
BP	GO:0042732	D-xylose metabolic process	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IDA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003878	ATP citrate synthase activity	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005797	Golgi medial cisterna	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006491	N-glycan processing	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009346	ATP-independent citrate lyase complex	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
MF	GO:0010427	abscisic acid binding	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019840	isoprenoid binding	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
CC	GO:0031985	Golgi cisterna	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0033293	monocarboxylic acid binding	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
CC	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	IEP	HCCA
MF	GO:0042562	hormone binding	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
MF	GO:0043178	alcohol binding	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016040	NAD(P)-bd_dom	124	418

External Links

No external refs found!

AT3G53520 (UXS1, ATUXS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation