AT3G47470 (CAB4, LHCA4)

Aliases : CAB4, LHCA4

Description : light-harvesting chlorophyll-protein complex I subunit A4

Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47470
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264770	CAB4, LHCA4,...	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.17	OrthoFinder output from all 47 species
AMTR_s00013p00180670	LHCA2,...	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.14	OrthoFinder output from all 47 species
AMTR_s00131p00114510	evm_27.TU.AmTr_v1...	Photosystem I chlorophyll a/b-binding protein 6,...	0.2	OrthoFinder output from all 47 species
Adi_g001938	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.18	OrthoFinder output from all 47 species
Adi_g113731	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Aev_g04468	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.18	OrthoFinder output from all 47 species
Aev_g05867	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Aev_g08180	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g13249	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g00950	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Ala_g00983	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Ala_g21633	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.21	OrthoFinder output from all 47 species
Als_g05433	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Als_g07082	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Als_g11618	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Als_g39064	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g02952	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Aob_g08832	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.15	OrthoFinder output from all 47 species
Aob_g10644	LHCA2	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Aob_g11303	LHCA2	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Aob_g12635	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.05	OrthoFinder output from all 47 species
Aob_g13294	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Aob_g17482	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g17797	LHCA2*1, LHCA6	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g18931	LHCA2	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g01073	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g08471	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Aop_g12147	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.17	OrthoFinder output from all 47 species
Aop_g13138	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Aop_g21836	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36261	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Aspi01Gene37279.t1	LHCA2, Aspi01Gene37279	component *(LHCa2) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56262.t1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene61720.t1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Aspi01Gene65950.t1	LHCA2, Aspi01Gene65950	component *(LHCa2) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Azfi_s0013.g013231	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.11	OrthoFinder output from all 47 species
Azfi_s0551.g076608	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.07	OrthoFinder output from all 47 species
Cba_g01741	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Cba_g06305	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Cba_g15852	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g21696	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g36933	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Ceric.21G064400.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.25	OrthoFinder output from all 47 species
Ceric.22G073900.1	LHCA2, Ceric.22G073900	component *(LHCa2) of LHC-I complex & original...	0.2	OrthoFinder output from all 47 species
Ceric.28G031700.1	LHCA2, Ceric.28G031700	component *(LHCa2) of LHC-I complex & original...	0.23	OrthoFinder output from all 47 species
Ceric.33G037200.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.16	OrthoFinder output from all 47 species
Ceric.33G046000.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.2	OrthoFinder output from all 47 species
Cre06.g272650	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.28	OrthoFinder output from all 47 species
Cre06.g278213	CAB4, LHCA4	Chlorophyll a-b binding protein P4, chloroplastic...	0.21	OrthoFinder output from all 47 species
Cre10.g425900	CAB4, LHCA4	Chlorophyll a-b binding protein 4, chloroplastic...	0.24	OrthoFinder output from all 47 species
Cre10.g452050	CAB4, LHCA4	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.22	OrthoFinder output from all 47 species
Cre16.g687900	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.26	OrthoFinder output from all 47 species
Dac_g04068	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.18	OrthoFinder output from all 47 species
Dac_g13497	LHCA2	component *(LHCa4) of LHC-I complex & original description: none	0.18	OrthoFinder output from all 47 species
Dcu_g02371	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Dcu_g03606	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g09352	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Dcu_g29671	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.26	OrthoFinder output from all 47 species
Dcu_g34548	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.26	OrthoFinder output from all 47 species
Dcu_g45197	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g02029	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Dde_g16731	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Ehy_g20973	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01007988001	CAB4, LHCA4	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.26	OrthoFinder output from all 47 species
GSVIVT01009498001	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.05	OrthoFinder output from all 47 species
GSVIVT01010483001	LHCA2	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.12	OrthoFinder output from all 47 species
Gb_08408	CAB4, LHCA4	component LHCa4 of LHC-I complex	0.18	OrthoFinder output from all 47 species
Gb_25594	LHCA5	Photosystem I chlorophyll a/b-binding protein 5,...	0.03	OrthoFinder output from all 47 species
Gb_32082	LHCA2	component LHCa2 of LHC-I complex	0.17	OrthoFinder output from all 47 species
LOC_Os02g52650.1	LHCA5, LOC_Os02g52650	component LHCa5 of LHC-I complex	0.03	OrthoFinder output from all 47 species
LOC_Os07g38960.1	LHCA2, LOC_Os07g38960	component LHCa2 of LHC-I complex	0.23	OrthoFinder output from all 47 species
LOC_Os08g33820.1	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.18	OrthoFinder output from all 47 species
Len_g09864	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Len_g12015	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Len_g17260	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Len_g55433	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g00790	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
MA_65346g0010	CAB4, LHCA4	Chlorophyll a-b binding protein P4, chloroplastic...	0.16	OrthoFinder output from all 47 species
Mp3g07840.1	CAB4, LHCA4	component LHCa4 of LHC-I complex	0.24	OrthoFinder output from all 47 species
Mp8g13180.1	LHCA2	component LHCa2 of LHC-I complex	0.24	OrthoFinder output from all 47 species
Msp_g01556	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Msp_g04666	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Msp_g12268	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g00555	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.17	OrthoFinder output from all 47 species
Nbi_g05658	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Nbi_g11030	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g16925	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g07782	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Ore_g07783	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g43266	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Ore_g43267	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.16	OrthoFinder output from all 47 species
Pir_g17334	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Pir_g19526	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.04	OrthoFinder output from all 47 species
Pir_g19768	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g08290	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c20_23240V3.1	LHCA2, Pp3c20_23240	photosystem I light harvesting complex gene 2	0.13	OrthoFinder output from all 47 species
Ppi_g12016	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Ppi_g16001	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.04	OrthoFinder output from all 47 species
Ppi_g18284	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013113	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016013	LHCA2	component *(LHCa2) of LHC-I complex & original...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017225	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.06	OrthoFinder output from all 47 species
Sam_g10927	No alias	component *(LHCa4) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Sam_g16961	No alias	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Sam_g40409	No alias	component *(LHCa2) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Smo270427	CAB4, LHCA4	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.15	OrthoFinder output from all 47 species
Smo403333	LHCA5	Photosystem I chlorophyll a/b-binding protein 5,...	0.03	OrthoFinder output from all 47 species
Smo446130	LHCA2	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.09	OrthoFinder output from all 47 species
Solyc03g115900.4.1	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.33	OrthoFinder output from all 47 species
Solyc06g069730.3.1	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.2	OrthoFinder output from all 47 species
Solyc07g022900.4.1	LHCA5, Solyc07g022900	component LHCa5 of LHC-I complex	0.06	OrthoFinder output from all 47 species
Solyc10g006230.3.1	LHCA2, Solyc10g006230	component LHCa2 of LHC-I complex	0.28	OrthoFinder output from all 47 species
Spa_g04945	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Spa_g04946	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Spa_g08046	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.05	OrthoFinder output from all 47 species
Spa_g11550	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g13077	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g16233	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g29531	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Tin_g04383	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.17	OrthoFinder output from all 47 species
Tin_g06738	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10537	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.16	OrthoFinder output from all 47 species
Tin_g13923	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Zm00001e004129_P001	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.25	OrthoFinder output from all 47 species
Zm00001e015945_P001	LHCA5, Zm00001e015945	component LHCa5 of LHC-I complex	0.03	OrthoFinder output from all 47 species
Zm00001e022453_P001	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.24	OrthoFinder output from all 47 species
Zm00001e035349_P002	LHCA2, Zm00001e035349	component LHCa2 of LHC-I complex	0.24	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010287	plastoglobule	IDA	Interproscan
BP	GO:0015979	photosynthesis	ISS	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016168	chlorophyll binding	ISS	Interproscan
MF	GO:0016168	chlorophyll binding	NAS	Interproscan
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
CC	GO:0030076	light-harvesting complex	ISS	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009503	thylakoid light-harvesting complex	IEP	HCCA
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009533	chloroplast stromal thylakoid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
CC	GO:0009782	photosystem I antenna complex	IEP	HCCA
CC	GO:0009783	photosystem II antenna complex	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010196	nonphotochemical quenching	IEP	HCCA
BP	GO:0010205	photoinhibition	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:1905156	negative regulation of photosynthesis	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:1990066	energy quenching	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	64	223

External Links

No external refs found!

AT3G47470 (CAB4, LHCA4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation