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  5. AT3G46320

AT3G46320


Description : Histone superfamily protein


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G46320
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
AMTR_s00007p00186150 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Adi_g006378 No alias histone *(H4) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g013645 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013963 No alias histone *(H4) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g128464 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g06073 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17108.t1 Aspi01Gene17108 histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30988 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G005700.1 Ceric.05G005700 histone *(H4) & original description: pacid=50578064... 0.02 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.04 OrthoFinder output from all 47 species
Ceric.12G062500.1 Ceric.12G062500 histone *(H4) & original description: pacid=50600733... 0.05 OrthoFinder output from all 47 species
Ceric.12G065600.1 Ceric.12G065600 histone *(H4) & original description: pacid=50601973... 0.05 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.07 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.07 OrthoFinder output from all 47 species
Ceric.12G081100.1 Ceric.12G081100 histone *(H4) & original description: pacid=50601273... 0.06 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.07 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.07 OrthoFinder output from all 47 species
Ceric.29G054900.1 Ceric.29G054900 histone *(H4) & original description: pacid=50625709... 0.04 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.09 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.07 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
Dac_g11115 No alias histone *(H4) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016577001 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.06 OrthoFinder output from all 47 species
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Gb_10373 No alias histone (H4) 0.13 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Gb_15454 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_15455 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.09 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.09 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
Gb_25031 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_28215 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
LOC_Os01g61920.1 LOC_Os01g61920 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os04g49420.1 LOC_Os04g49420 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38740.1 LOC_Os05g38740 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.1 OrthoFinder output from all 47 species
LOC_Os10g39410.1 LOC_Os10g39410 histone (H4) 0.03 OrthoFinder output from all 47 species
Len_g03946 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55897 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
MA_10427181g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_10428142g0010 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
MA_10433778g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_116904g0010 No alias histone (H4) 0.08 OrthoFinder output from all 47 species
MA_12995g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_141877g0030 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_234535g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_38882g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_465285g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
MA_73436g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_74102g0010 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
MA_83574g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_89764g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp4g03090.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Pp3c22_22340V3.1 Pp3c22_22340 histone H4 0.03 OrthoFinder output from all 47 species
Pp3c4_22160V3.1 Pp3c4_22160 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022786 No alias histone *(H4) & original description: CDS=1-312 0.02 OrthoFinder output from all 47 species
Sam_g06107 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Smo150847 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Smo167497 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from all 47 species
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.12 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.11 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.1 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.06 OrthoFinder output from all 47 species
Solyc06g072240.1.1 Solyc06g072240 histone (H4) 0.12 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.14 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.12 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.06 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.1 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.13 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.12 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g53626 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03600 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g42771 No alias histone *(H4) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.08 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.09 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.1 OrthoFinder output from all 47 species
Zm00001e019368_P001 Zm00001e019368 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e023245_P001 Zm00001e023245 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.08 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.08 OrthoFinder output from all 47 species
Zm00001e034230_P001 Zm00001e034230 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e034964_P001 Zm00001e034964 histone (H4) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISS Interproscan
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006334 nucleosome assembly ISS Interproscan
BP GO:0051276 chromosome organization ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0016048 detection of temperature stimulus IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!