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  5. AT3G45780

AT3G45780 (RPT1, PHOT1, NPH1, JK224)


Aliases : RPT1, PHOT1, NPH1, JK224

Description : phototropin 1


Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45780

Target Alias Description ECC score Gene Family Method Actions
Adi_g022903 RPT1, PHOT1, NPH1, JK224 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ala_g26691 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Als_g03880 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aop_g39214 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008000 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g16281 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g12546 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
GSVIVT01025082001 RPT1, PHOT1, NPH1, JK224 External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
MA_177704g0010 NPL1, PHOT2 Phototropin-2 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Mp5g03810.1 NPL1, PHOT2 protein kinase (AGC-VIII). phototropin light receptor.... 0.04 OrthoFinder output from all 47 species
Msp_g31744 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g02449 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ore_g19673 RPT1, PHOT1, NPH1, JK224 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ppi_g08339 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Ppi_g32597 RPT1, PHOT1, NPH1, JK224 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g50260 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Tin_g14844 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e020806_P002 RPT1, PHOT1,... protein kinase (AGC-VIII). phototropin light receptor.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IDA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009637 response to blue light IGI Interproscan
BP GO:0009637 response to blue light RCA Interproscan
BP GO:0009638 phototropism IMP Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
MF GO:0009882 blue light photoreceptor activity IDA Interproscan
CC GO:0009898 cytoplasmic side of plasma membrane IDA Interproscan
BP GO:0009903 chloroplast avoidance movement IMP Interproscan
BP GO:0009904 chloroplast accumulation movement IMP Interproscan
CC GO:0009986 cell surface IDA Interproscan
BP GO:0010114 response to red light RCA Interproscan
BP GO:0010119 regulation of stomatal movement IMP Interproscan
BP GO:0010155 regulation of proton transport IGI Interproscan
BP GO:0010155 regulation of proton transport RCA Interproscan
MF GO:0010181 FMN binding IDA Interproscan
MF GO:0010181 FMN binding TAS Interproscan
BP GO:0010218 response to far red light RCA Interproscan
BP GO:0010362 negative regulation of anion channel activity by blue light IMP Interproscan
MF GO:0016301 kinase activity ISS Interproscan
MF GO:0042802 identical protein binding IPI Interproscan
BP GO:0046777 protein autophosphorylation IDA Interproscan
BP GO:0046777 protein autophosphorylation RCA Interproscan
BP GO:0046777 protein autophosphorylation TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010161 red light signaling pathway IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010600 regulation of auxin biosynthetic process IEP HCCA
BP GO:0010617 circadian regulation of calcium ion oscillation IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046885 regulation of hormone biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071491 cellular response to red light IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090354 regulation of auxin metabolic process IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 205 301
IPR000014 PAS 485 577
IPR000719 Prot_kinase_dom 665 952
No external refs found!