AT3G28910 (MYB30, ATMYB30)

Aliases : MYB30, ATMYB30

Description : myb domain protein 30

Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28910
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00037p00177500	ATMYB101,...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AMTR_s00119p00069270	MYB60, AtMYB60,...	Myb-related protein 306 OS=Antirrhinum majus	0.02	OrthoFinder output from all 47 species
AT5G15310	ATMIXTA, MYB16, ATMYB16	myb domain protein 16	0.03	OrthoFinder output from all 47 species
AT5G40330	ATMYBRTF, ATMYB23, MYB23	myb domain protein 23	0.01	OrthoFinder output from all 47 species
Adi_g006834	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Adi_g011817	AtMYB20, MYB20	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g20862	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Als_g38063	AtMYB50, MYB50	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g49556	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aob_g08939	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aop_g04469	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04870	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Aop_g17526	AtMYB50, MYB50	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19361	AtMYB50, MYB50	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene01695.t1	AtMYB20, MYB20,...	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04939.t1	Aspi01Gene04939	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30507.t1	MYB103,...	transcriptional regulator *(MS188) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene67206.t1	ATMIXTA, MYB16,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene67211.t1	ATMIXTA, MYB16,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g18072	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.02	OrthoFinder output from all 47 species
Ceric.04G003000.1	ATMIXTA, MYB16,...	not classified & original description: pacid=50631509...	0.04	OrthoFinder output from all 47 species
Ceric.05G075100.1	AtMYB20, MYB20,...	MYB class-R2R3 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g14836	ATMYB61, MYB61	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21819	MYB86, ATMYB86	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01004317001	AtMYB42, MYB42	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01015102001	MYB3, ATMYB3	RNA biosynthesis.transcriptional activation.MYB...	0.01	OrthoFinder output from all 47 species
GSVIVT01018577001	AtMYB42, MYB42	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01024036001	MYB32, AtMYB32	RNA biosynthesis.transcriptional activation.MYB...	0.01	OrthoFinder output from all 47 species
GSVIVT01025269001	AtMYB83, MYB83	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01032088001	AtMYB83, MYB83	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
Gb_29789	MYB84, RAX3, ATMYB84	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g07450.1	MYB86, ATMYB86,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g49160.1	MYB84, RAX3,...	transcription factor (MYB)	0.01	OrthoFinder output from all 47 species
LOC_Os02g02370.1	MYB19, AtMYB19,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
LOC_Os02g46780.1	MYB58, ATMYB58,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os04g43680.1	ATMYB15, ATY19,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
LOC_Os05g46610.1	MYB86, ATMYB86,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
LOC_Os06g14670.1	AtMYB20, MYB20,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
LOC_Os08g05520.1	MYB103,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
LOC_Os10g33810.1	ATMYB15, ATY19,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Len_g00614	AtMYB50, MYB50	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g23553	ATMYB46, MYB46	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03025	MYB86, ATMYB86	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g13620	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Lfl_g18459	MYB19, AtMYB19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10431212g0010	MYB103, AtMYB103	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
MA_10435380g0010	ATMYB46, MYB46	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
MA_37851g0010	AtMYB83, MYB83	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_98947g0010	ATMYB35, TDF1	Transcription factor MYB80 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Msp_g12152	ATMYB61, MYB61	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g19516	AtMYB20, MYB20	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Msp_g21179	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Nbi_g05300	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g28735	ATMIXTA, MYB16, ATMYB16	transcriptional regulator *(TDF1) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g28265	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Ppi_g01997	AtMYB107, MYB107	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04459	AtMYB20, MYB20	MYB class-R2R3 transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g08138	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16425	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ppi_g25791	ATMYB61, MYB61	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g30805	ATMYB61, MYB61	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003255	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018975	ATMIXTA, MYB16, ATMYB16	not classified & original description: CDS=1-1983	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025371	MYB103, AtMYB103	not classified & original description: CDS=1-951	0.03	OrthoFinder output from all 47 species
Solyc01g005660.3.1	ATMYB5, MYB5,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc01g111500.3.1	ATMYB4, MYB4,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc02g067760.4.1	ATMYB21, MYB21,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc03g005570.3.1	ATMYB14, MYB14,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Solyc06g083900.3.1	ATMYB13, MYB13,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc08g081500.3.1	MYB103,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc12g005640.2.1	ATMYB14, MYB14,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Spa_g07357	MYB45, AtMYB45	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g21768	AtMYB50, MYB50	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004140_P002	ATMIXTA, MYB16,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e005823_P001	MYB36, AtMYB36,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e010546_P001	MYB41, AtMYB41,...	transcription factor (MYB)	0.01	OrthoFinder output from all 47 species
Zm00001e011944_P001	MYB84, RAX3,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e012681_P001	ATMYB15, ATY19,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e015235_P001	MYB19, AtMYB19,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e017496_P001	ATMYB12, PFG1,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e023277_P001	ATMYB72, MYB72,...	transcription factor (MYB)	0.01	OrthoFinder output from all 47 species
Zm00001e026166_P001	AtMYB112,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e027003_P001	ATMYB4, MYB4,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e027531_P001	ATMYB61, MYB61,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e029600_P001	ATMYB59-1,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e034807_P001	AtMYB42, MYB42,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e040334_P001	BOS1, AtMYB108,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEP	Interproscan
BP	GO:0009626	plant-type hypersensitive response	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0002213	defense response to insect	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	HCCA
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006560	proline metabolic process	IEP	HCCA
BP	GO:0006561	proline biosynthetic process	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0006949	syncytium formation	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
CC	GO:0009368	endopeptidase Clp complex	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015692	lead ion transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015850	organic hydroxy compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
CC	GO:0030176	obsolete integral component of endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
MF	GO:0031490	chromatin DNA binding	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0046864	isoprenoid transport	IEP	HCCA
BP	GO:0046865	terpenoid transport	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
MF	GO:0050113	inositol oxygenase activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0080168	abscisic acid transport	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	67	112
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT3G28910 (MYB30, ATMYB30)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation