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  5. Pnu_g30298

Pnu_g30298 (IQD5)


Aliases : IQD5

Description : not classified & original description: none


Gene families : OG0009988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30298

Target Alias Description ECC score Gene Family Method Actions
Als_g47961 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57011 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05456 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 171 185
IPR000048 IQ_motif_EF-hand-BS 146 165
No external refs found!