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  5. AT3G24290

AT3G24290 (AMT1;5)


Aliases : AMT1;5

Description : ammonium transporter 1;5


Gene families : OG0001233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24290
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT3G24300 AMT1;3, ATAMT1;3 ammonium transporter 1;3 0.07 OrthoFinder output from all 47 species
Ala_g27462 ATAMT1, AMT1;1, ATAMT1;1 ammonium transporter *(AMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40850 AMT1;3, ATAMT1;3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25906.t1 AMT1;3,... ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G069300.1 AMT1;2,... ammonium transporter *(AMT1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.27G043300.1 AMT1;2,... ammonium transporter *(AMT1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre09.g400750 AMT1;5 Solute transport.channels.AMT family.ammonium... 0.02 OrthoFinder output from all 47 species
Cre12.g531000 AMT1;5 Solute transport.channels.AMT family.ammonium... 0.02 OrthoFinder output from all 47 species
Dcu_g03739 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001853001 ATAMT1, AMT1;1, ATAMT1;1 Ammonium transporter 1 member 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_41196 No alias ammonium transporter (AMT1) 0.04 OrthoFinder output from all 47 species
LOC_Os02g40710.1 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.06 OrthoFinder output from all 47 species
LOC_Os02g40730.1 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.07 OrthoFinder output from all 47 species
LOC_Os04g43070.1 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
MA_369429g0010 AMT1;2, ATAMT1;2 ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
Mp8g05310.1 AMT1;3, ATAMT1;3 ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
Pnu_g10318 AMT1;2, ATAMT1;2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28292 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03031 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo163770 AMT1;3, ATAMT1;3 Solute transport.channels.AMT family.ammonium... 0.07 OrthoFinder output from all 47 species
Solyc03g045070.1.1 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
Zm00001e007580_P001 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006810 transport ISS Interproscan
MF GO:0008519 ammonium transmembrane transporter activity IDA Interproscan
MF GO:0008519 ammonium transmembrane transporter activity ISS Interproscan
BP GO:0015695 organic cation transport ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071249 cellular response to nitrate IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 49 470
No external refs found!