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AT3G21720 (ICL)


Aliases : ICL

Description : isocitrate lyase


Gene families : OG0002469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21720
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00247810 ICL,... Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010083 No alias not classified & original description: CDS=1-351 0.03 OrthoFinder output from all 47 species
Ceric.27G062400.1 ICL, Ceric.27G062400 EC_4.1 carbon-carbon lyase & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.27G062500.1 ICL, Ceric.27G062500 EC_4.1 carbon-carbon lyase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.29G039400.1 ICL, Ceric.29G039400 EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
Cre06.g282800 No alias Lipid metabolism.lipid degradation.fatty acid... 0.07 OrthoFinder output from all 47 species
Dac_g22601 ICL EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030608001 ICL Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
Gb_04100 ICL isocitrate lyase 0.05 OrthoFinder output from all 47 species
LOC_Os07g34520.1 ICL, LOC_Os07g34520 isocitrate lyase 0.04 OrthoFinder output from all 47 species
Pir_g17140 ICL EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07952 ICL EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035137_P004 ICL, Zm00001e035137 isocitrate lyase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008152 metabolic process ISS Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
MF GO:0003994 aconitate hydratase activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005274 allantoin:proton symporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006101 citrate metabolic process IEP HCCA
BP GO:0006102 isocitrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0015720 allantoin transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031998 regulation of fatty acid beta-oxidation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046320 regulation of fatty acid oxidation IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048462 carpel formation IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0080093 regulation of photorespiration IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR006254 Isocitrate_lyase 21 551
No external refs found!