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  5. AT3G17650

AT3G17650 (YSL5, PDE321)


Aliases : YSL5, PDE321

Description : YELLOW STRIPE like 5


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17650
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00228960 YSL6,... Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00045420 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00064550 YSL7,... Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00065510 YSL6,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.02 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.06 OrthoFinder output from all 47 species
Aev_g05443 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02368 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ala_g20569 YSL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38157 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g03162 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g18777 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g22814 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Als_g28455 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g19816 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g71362 ATYSL1, YSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52239.t1 YSL7, Aspi01Gene52239 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52240.t1 YSL7, Aspi01Gene52240 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G047800.1 YSL6, Ceric.16G047800 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g40018 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Gb_40334 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os02g02460.1 YSL5, PDE321,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Len_g12937 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Mp4g01710.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Msp_g13893 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g08018 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g42346 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43717 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g094280.4.1 YSL6, Solyc02g094280 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Spa_g29812 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Tin_g46259 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e026899_P002 YSL7, Zm00001e026899 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e028817_P001 YSL7, Zm00001e028817 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006857 oligopeptide transport ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0007172 signal complex assembly IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009882 blue light photoreceptor activity IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
CC GO:0010318 pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010617 circadian regulation of calcium ion oscillation IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055081 monoatomic anion homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 62 684
No external refs found!