1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G13460

AT3G13460 (ECT2)


Aliases : ECT2

Description : evolutionarily conserved C-terminal region 2


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13460

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00073360 ECT2,... No description available 0.04 OrthoFinder output from all 47 species
AT3G17330 ECT6 evolutionarily conserved C-terminal region 6 0.02 OrthoFinder output from all 47 species
Adi_g018882 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087071 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108043 ECT5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02554 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12419 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12670 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27732.t2 ECT5, Aspi01Gene27732 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26970 ECT5 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g70631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G060700.1 ECT5, Ceric.05G060700 methylation reader *(ECT) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G048900.1 ECT8, Ceric.38G048900 methylation reader *(ECT) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g09075 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07823 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029460001 ECT5 No description available 0.03 OrthoFinder output from all 47 species
Gb_16810 ECT8 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Gb_38284 ECT5 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g06240.1 ECT4, LOC_Os03g06240 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Len_g55797 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02026 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05658 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429321g0010 ECT7 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
MA_130754g0010 ECT2 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
MA_26834g0010 ECT8 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
MA_29812g0010 ECT7 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Msp_g14226 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09604 ECT3 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25270 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g028860.3.1 ECT2, Solyc01g028860 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Spa_g02267 ECT7 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003958 NADPH-hemoprotein reductase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010205 photoinhibition IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 444 580
No external refs found!