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AT3G12100


Description : Cation efflux family protein


Gene families : OG0007732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G12100
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cba_g36640 No alias zinc cation transporter *(Zn-CDF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16412 No alias zinc cation transporter *(Zn-CDF) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006812 monoatomic cation transport ISS Interproscan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISS Interproscan
BP GO:0009624 response to nematode IEP Interproscan
MF GO:0015562 efflux transmembrane transporter activity ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002524 Cation_efflux 114 312
No external refs found!