1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G11000

AT3G11000


Description : DCD (Development and Cell Death) domain protein


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G054900.1 Ceric.24G054900 not classified & original description: pacid=50628695... 0.04 OrthoFinder output from all 47 species
GSVIVT01024945001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030266001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.07 OrthoFinder output from all 47 species
Gb_18799 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g07140.1 LOC_Os01g07140 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 121.0) 0.03 OrthoFinder output from all 47 species
Len_g02771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_26274g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g43148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.05 OrthoFinder output from all 47 species
Zm00001e011644_P004 Zm00001e011644 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 267.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010093 specification of floral organ identity RCA Interproscan
BP GO:0031540 regulation of anthocyanin biosynthetic process RCA Interproscan
BP GO:0048440 carpel development RCA Interproscan
BP GO:0048507 meristem development RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
CC GO:0042645 mitochondrial nucleoid IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048462 carpel formation IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051131 chaperone-mediated protein complex assembly IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070407 oxidation-dependent protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 13 140
No external refs found!