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  5. AT3G06170

AT3G06170


Description : Serinc-domain containing serine and sphingolipid biosynthesis protein


Gene families : OG0002419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G06170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00091080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g015242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre09.g412803 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g21220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_330807g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g17830.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g12396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018369 No alias not classified & original description: CDS=53-1303 0.02 OrthoFinder output from all 47 species
Sam_g07651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g117770.3.1 Solyc03g117770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g19294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004337_P003 Zm00001e004337 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016100_P001 Zm00001e016100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
MF GO:0003985 acetyl-CoA C-acetyltransferase activity IEP HCCA
MF GO:0003988 acetyl-CoA C-acyltransferase activity IEP HCCA
MF GO:0004707 MAP kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016453 C-acetyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046864 isoprenoid transport IEP HCCA
BP GO:0046865 terpenoid transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080168 abscisic acid transport IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 7 407
No external refs found!