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  5. AT3G05940

AT3G05940


Description : Protein of unknown function (DUF300)


Gene families : OG0003152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05940
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Adi_g107227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_20320V3.1 Pp3c1_20320 Protein of unknown function (DUF300) 0.01 OrthoFinder output from all 47 species
Zm00001e006242_P001 Zm00001e006242 Protein LAZ1 homolog 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e011715_P003 Zm00001e011715 Protein LAZ1 homolog 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033193_P001 Zm00001e033193 Protein LAZ1 homolog 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005178 Ostalpha/TMEM184C 10 269
No external refs found!