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AT3G05710 (SYP43, ATSYP43)


Aliases : SYP43, ATSYP43

Description : syntaxin of plants 43


Gene families : OG0004092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05710
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G02195 ATSYP42, SYP42,... syntaxin of plants 42 0.03 OrthoFinder output from all 47 species
GSVIVT01028068001 ATSYP41, ATTLG2A, SYP41 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Lfl_g01584 ATSYP41, ATTLG2A, SYP41 Qa-type SYP4-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Msp_g00479 SYP43, ATSYP43 Qa-type SYP4-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Solyc01g100170.3.1 SYP43, ATSYP43,... SYP4-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity TAS Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
BP GO:0006886 intracellular protein transport TAS Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport RCA Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport RCA Interproscan
BP GO:0007030 Golgi organization IGI Interproscan
BP GO:0007034 vacuolar transport IGI Interproscan
BP GO:0009306 protein secretion IGI Interproscan
BP GO:0043090 amino acid import RCA Interproscan
BP GO:1900150 regulation of defense response to fungus IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 270 322
No external refs found!