Aliases : CLPS3
Description : CLP-similar protein 3
Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g08750 | CLPS3 | component *(Clp1) of Cleavage Factor II (CF-IIm) complex... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g194800 | CLPS3 | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | RCA | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
CC | GO:0005849 | mRNA cleavage factor complex | IPI | Interproscan |
CC | GO:0005849 | mRNA cleavage factor complex | ISS | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | RCA | Interproscan |
BP | GO:0006397 | mRNA processing | IMP | Interproscan |
BP | GO:0006397 | mRNA processing | RCA | Interproscan |
BP | GO:0009640 | photomorphogenesis | RCA | Interproscan |
BP | GO:0009793 | embryo development ending in seed dormancy | RCA | Interproscan |
BP | GO:0009845 | seed germination | RCA | Interproscan |
BP | GO:0009908 | flower development | IMP | Interproscan |
BP | GO:0009909 | regulation of flower development | RCA | Interproscan |
BP | GO:0009933 | meristem structural organization | RCA | Interproscan |
BP | GO:0010162 | seed dormancy process | RCA | Interproscan |
BP | GO:0010182 | sugar mediated signaling pathway | RCA | Interproscan |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IMP | Interproscan |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | RCA | Interproscan |
BP | GO:0016567 | protein ubiquitination | RCA | Interproscan |
BP | GO:0019915 | lipid storage | RCA | Interproscan |
BP | GO:0030422 | siRNA processing | RCA | Interproscan |
BP | GO:0035196 | miRNA processing | RCA | Interproscan |
BP | GO:0043687 | post-translational protein modification | RCA | Interproscan |
BP | GO:0045893 | positive regulation of DNA-templated transcription | RCA | Interproscan |
BP | GO:0048827 | phyllome development | IMP | Interproscan |
BP | GO:0050826 | response to freezing | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000354 | cis assembly of pre-catalytic spliceosome | IEP | HCCA |
BP | GO:0000578 | embryonic axis specification | IEP | HCCA |
BP | GO:0002238 | response to molecule of fungal origin | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004407 | histone deacetylase activity | IEP | HCCA |
MF | GO:0004708 | MAP kinase kinase activity | IEP | HCCA |
MF | GO:0004712 | protein serine/threonine/tyrosine kinase activity | IEP | HCCA |
CC | GO:0005654 | nucleoplasm | IEP | HCCA |
CC | GO:0005686 | U2 snRNP | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
MF | GO:0008327 | methyl-CpG binding | IEP | HCCA |
BP | GO:0009798 | axis specification | IEP | HCCA |
BP | GO:0009880 | embryonic pattern specification | IEP | HCCA |
CC | GO:0010369 | chromocenter | IEP | HCCA |
BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | HCCA |
BP | GO:0010431 | seed maturation | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
CC | GO:0015030 | Cajal body | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
BP | GO:0016458 | obsolete gene silencing | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
CC | GO:0016604 | nuclear body | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
MF | GO:0019213 | deacetylase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
MF | GO:0033558 | protein lysine deacetylase activity | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No external refs found! |