AT2G47900 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : tubby like protein 3


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47900
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.03 OrthoFinder output from all 47 species
Adi_g008982 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110282 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19726 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08936 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04143.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25766.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47134.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z003500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G062400.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G011000.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.14 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
Dac_g08196 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06248 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19890 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08281 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09092 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06851 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36190.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Ppi_g18593 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19118 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo83983 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Tin_g00701 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e015581_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006355 regulation of DNA-templated transcription RCA Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008081 phosphoric diester hydrolase activity ISS Interproscan
CC GO:0009536 plastid IDA Interproscan
BP GO:0009620 response to fungus IMP Interproscan
BP GO:0009651 response to salt stress IDA Interproscan
BP GO:0042542 response to hydrogen peroxide IEP Interproscan
BP GO:0043687 post-translational protein modification RCA Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription RCA Interproscan
BP GO:0071470 cellular response to osmotic stress IDA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015783 GDP-fucose transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0072334 UDP-galactose transmembrane transport IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 115 401
IPR001810 F-box_dom 51 102
No external refs found!