AT2G46600

Description : Calcium-binding EF-hand family protein

Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46600

Target	Alias	Description	ECC score	Gene Family Method
Aev_g05269	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g23750	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.30G071000.1	Ceric.30G071000	not classified & original description: pacid=50608555...	0.03	OrthoFinder output from all 47 species
MA_10168324g0010	No alias	Calcium-binding protein KIC OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Pnu_g12450	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g28291	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g079720.1.1	PBP1, Solyc02g079720	Calcium-binding protein KRP1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc07g063690.1.1	PBP1, Solyc07g063690	Calcium-binding protein PBP1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc10g006660.3.1	Solyc10g006660	Calcium-binding protein KRP1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IDA	Interproscan
MF	GO:0005509	calcium ion binding	ISS	Interproscan
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010091	trichome branching	IMP	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0042744	hydrogen peroxide catabolic process	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	56	105

External Links

No external refs found!