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  5. AT2G41950

AT2G41950


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0007489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41950
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Ceric.08G047700.1 ATFMN/FHY,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cre01.g025250 ATFMN/FHY, FMN/FHY Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder output from all 47 species
Gb_39344 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g17409 ATFMN/FHY, FMN/FHY EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e000954_P001 Zm00001e000954 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
CC GO:0009508 plastid chromosome IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!