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  5. AT2G39530

AT2G39530


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0011355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39530
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00108110 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01016540001 No alias CASP-like protein 4D1 OS=Ricinus communis 0.05 OrthoFinder output from all 47 species
Solyc03g098090.2.1 Solyc03g098090 CASP-like protein 4D1 OS=Ricinus communis... 0.03 OrthoFinder output from all 47 species
Solyc04g011467.1.1 Solyc04g011467 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc04g011480.3.1 Solyc04g011480 CASP-like protein PIMP1 OS=Capsicum annuum... 0.05 OrthoFinder output from all 47 species
Solyc04g051270.2.1 Solyc04g051270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g072350.3.1 Solyc06g072350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g006455.1.1 Solyc11g006455 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0043090 amino acid import RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 12 157
No external refs found!