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  5. AT2G38830

AT2G38830


Description : Ubiquitin-conjugating enzyme/RWD-like protein


Gene families : OG0001430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001430_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38830
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g013112 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g08412 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01332 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g01068 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021324 ELC, ATELC not classified & original description: CDS=242-1315 0.03 OrthoFinder output from all 47 species
Solyc09g065770.1.1 Solyc09g065770 Protein ELC-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004551 dinucleotide phosphatase activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
MF GO:0047884 FAD diphosphatase activity IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008883 UEV_N 38 157
IPR017916 SB_dom 277 321
No external refs found!