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Description : Cysteine proteinases superfamily protein
Gene families : OG0007365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007365_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G38025 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0045.g029896 | No alias | deubiquitinase *(OTU3-4) & original description: CDS=174-884 | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01034018001 | No alias | OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g15930.2 | LOC_Os03g15930 | deubiquitinase (OTU3-4) | 0.03 | OrthoFinder output from all 47 species | |
| MA_34573g0010 | No alias | deubiquitinase (OTU3-4) | 0.03 | OrthoFinder output from all 47 species | |
| MA_99324g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0115.g020952 | No alias | deubiquitinase *(OTU3-4) & original description: CDS=117-806 | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009534 | chloroplast thylakoid | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009657 | plastid organization | IEP | HCCA |
| BP | GO:0009658 | chloroplast organization | IEP | HCCA |
| BP | GO:0009668 | plastid membrane organization | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009773 | photosynthetic electron transport in photosystem I | IEP | HCCA |
| BP | GO:0009902 | chloroplast relocation | IEP | HCCA |
| BP | GO:0010027 | thylakoid membrane organization | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| BP | GO:0019750 | chloroplast localization | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| CC | GO:0031976 | plastid thylakoid | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0042742 | defense response to bacterium | IEP | HCCA |
| BP | GO:0042793 | plastid transcription | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051640 | organelle localization | IEP | HCCA |
| BP | GO:0051644 | plastid localization | IEP | HCCA |
| BP | GO:0051656 | establishment of organelle localization | IEP | HCCA |
| BP | GO:0051667 | establishment of plastid localization | IEP | HCCA |
| BP | GO:0061024 | membrane organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003323 | OTU_dom | 82 | 182 |
| No external refs found! |