Aliases : AAc1, ACT1
Description : actin 1
Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT2G37620 | |
Cluster | HCCA: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00188200 | ACT7,... | Cytoskeleton.microfilament network.actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00062p00184900 | ACT7,... | Cytoskeleton.microfilament network.actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16802 | ACT7 | actin filament protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g52378 | ACT7 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g52379 | ACT7 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g12151 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g22713 | AAc1, ACT1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37063 | ACT7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G030400.1 | ACT7, Ceric.22G030400 | actin filament protein & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre13.g603700 | ACT11 | Cytoskeleton.microfilament network.actin filament protein | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g24197 | ACT7 | actin filament protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g51293 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07329 | ACT11 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g50885.1 | ACT11, LOC_Os03g50885 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g01600.2 | ACT7, LOC_Os05g01600 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g44350.1 | ACT11, LOC_Os12g44350 | actin filament protein | 0.04 | OrthoFinder output from all 47 species | |
MA_10427661g0030 | ACT7 | actin filament protein | 0.05 | OrthoFinder output from all 47 species | |
Mp6g11010.1 | ACT7 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
Mpzg00230.1 | AAc1, ACT1 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04666 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g09339 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g18686 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g054480.3.1 | ACT11, Solyc05g054480 | actin filament protein | 0.05 | OrthoFinder output from all 47 species | |
Solyc10g086460.2.1 | ACT4, Solyc10g086460 | actin filament protein | 0.04 | OrthoFinder output from all 47 species | |
Spa_g20294 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22438 | ACT7 | actin filament protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22439 | ACT7 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g54123 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005489_P002 | ACT11, Zm00001e005489 | actin filament protein | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e009080_P001 | ACT7, Zm00001e009080 | actin filament protein | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e012159_P001 | ACT11, Zm00001e012159 | actin filament protein | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e028670_P001 | ACT7, Zm00001e028670 | actin filament protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005200 | structural constituent of cytoskeleton | ISS | Interproscan |
CC | GO:0005618 | cell wall | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
CC | GO:0005829 | cytosol | IDA | Interproscan |
CC | GO:0005856 | cytoskeleton | TAS | Interproscan |
CC | GO:0005886 | plasma membrane | IDA | Interproscan |
BP | GO:0007010 | cytoskeleton organization | TAS | Interproscan |
CC | GO:0009506 | plasmodesma | IDA | Interproscan |
BP | GO:0048589 | developmental growth | IMP | Interproscan |
BP | GO:0048767 | root hair elongation | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000902 | cell morphogenesis | IEP | HCCA |
BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | HCCA |
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
CC | GO:0005884 | actin filament | IEP | HCCA |
CC | GO:0005938 | cell cortex | IEP | HCCA |
BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
BP | GO:0007155 | cell adhesion | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
BP | GO:0009826 | unidimensional cell growth | IEP | HCCA |
BP | GO:0009827 | plant-type cell wall modification | IEP | HCCA |
BP | GO:0009846 | pollen germination | IEP | HCCA |
BP | GO:0009860 | pollen tube growth | IEP | HCCA |
BP | GO:0009865 | pollen tube adhesion | IEP | HCCA |
BP | GO:0009932 | cell tip growth | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0009968 | negative regulation of signal transduction | IEP | HCCA |
BP | GO:0010191 | mucilage metabolic process | IEP | HCCA |
BP | GO:0010192 | mucilage biosynthetic process | IEP | HCCA |
BP | GO:0010214 | seed coat development | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0010648 | negative regulation of cell communication | IEP | HCCA |
BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
BP | GO:0023057 | negative regulation of signaling | IEP | HCCA |
CC | GO:0030133 | transport vesicle | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0035023 | regulation of Rho protein signal transduction | IEP | HCCA |
BP | GO:0035024 | negative regulation of Rho protein signal transduction | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
CC | GO:0042995 | cell projection | IEP | HCCA |
CC | GO:0045177 | apical part of cell | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0046364 | monosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046580 | negative regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0048354 | mucilage biosynthetic process involved in seed coat development | IEP | HCCA |
BP | GO:0048359 | mucilage metabolic process involved in seed coat development | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
BP | GO:0048868 | pollen tube development | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051058 | negative regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051703 | biological process involved in intraspecies interaction between organisms | IEP | HCCA |
CC | GO:0070382 | exocytic vesicle | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
CC | GO:0090406 | pollen tube | IEP | HCCA |
BP | GO:0098609 | cell-cell adhesion | IEP | HCCA |
CC | GO:0099080 | supramolecular complex | IEP | HCCA |
CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
CC | GO:0099503 | secretory vesicle | IEP | HCCA |
CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
BP | GO:1902532 | negative regulation of intracellular signal transduction | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004000 | Actin | 5 | 377 |
No external refs found! |