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  5. AT2G37150

AT2G37150


Description : RING/U-box superfamily protein


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37150

Target Alias Description ECC score Gene Family Method Actions
Aev_g28197 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g15334 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene08615.t1 Aspi01Gene08615 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g01777 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g43069 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g02249 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009465001 No alias No description available 0.03 OrthoFinder output from all 47 species
Msp_g09737 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g15773 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.02 OrthoFinder output from all 47 species
Pir_g19562 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015971 No alias not classified & original description: CDS=4183-6075 0.02 OrthoFinder output from all 47 species
Sam_g06274 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc09g007530.3.1 Solyc09g007530 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc12g096420.2.1 Solyc12g096420 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Zm00001e032431_P001 Zm00001e032431 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0010260 obsolete animal organ senescence RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 491 534
No external refs found!