AT2G31260 (APG9, ATAPG9)

Aliases : APG9, ATAPG9

Description : autophagy 9 (APG9)

Gene families : OG0004129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G31260

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00264860	APG9, ATAPG9,...	Vesicle trafficking.autophagosome formation.ATG9-2-18...	0.03	OrthoFinder output from all 47 species
Adi_g019339	APG9, ATAPG9	component *(ATG9) of autophagosome ATG9-2-18 membrane...	0.02	OrthoFinder output from all 47 species
Aspi01Gene24639.t1	APG9, ATAPG9,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.18G031700.1	APG9, ATAPG9,...	component *(ATG9) of autophagosome ATG9-2-18 membrane...	0.04	OrthoFinder output from all 47 species
Ceric.21G010500.1	APG9, ATAPG9,...	component *(ATG9) of autophagosome ATG9-2-18 membrane...	0.04	OrthoFinder output from all 47 species
Gb_31273	APG9, ATAPG9	component ATG9 of autophagosome ATG9-2-18 membrane...	0.03	OrthoFinder output from all 47 species
LOC_Os03g14380.1	APG9, ATAPG9,...	component ATG9 of autophagosome ATG9-2-18 membrane...	0.05	OrthoFinder output from all 47 species
LOC_Os10g07994.1	APG9, ATAPG9,...	component ATG9 of autophagosome ATG9-2-18 membrane...	0.03	OrthoFinder output from all 47 species
Sam_g40280	No alias	component *(ATG9) of autophagosome ATG9-2-18 membrane...	0.05	OrthoFinder output from all 47 species
Spa_g06178	APG9, ATAPG9	component *(ATG9) of autophagosome ATG9-2-18 membrane...	0.04	OrthoFinder output from all 47 species
Zm00001e001036_P001	APG9, ATAPG9,...	component ATG9 of autophagosome ATG9-2-18 membrane...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006914	autophagy	IMP	Interproscan
BP	GO:0006914	autophagy	ISS	Interproscan
BP	GO:0006914	autophagy	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0080129	proteasome core complex assembly	RCA	Interproscan
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010260	obsolete animal organ senescence	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007241	Autophagy-rel_prot_9	65	558

External Links

No external refs found!

AT2G31260 (APG9, ATAPG9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation