AT2G30170

Description : Protein phosphatase 2C family protein

Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G30170

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0095.g043630	No alias	phosphatase *(PBCP) & original description: CDS=45-986	0.04	OrthoFinder output from all 47 species
Cba_g68354	No alias	component *(eL29) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.1Z173900.1	Ceric.1Z173900	phosphatase *(PBCP) & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g09847	No alias	phosphatase *(PBCP) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g33331	No alias	phosphatase *(PBCP) & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g26968	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02459	No alias	phosphatase *(PBCP) & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01024641001	No alias	Photosynthesis.photophosphorylation.photosystem...	0.1	OrthoFinder output from all 47 species
GSVIVT01029794001	No alias	Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os01g07090.1	LOC_Os01g07090	photosynthetic acclimation PBCP phosphatase	0.07	OrthoFinder output from all 47 species
Lfl_g17211	No alias	phosphatase *(PBCP) & original description: none	0.08	OrthoFinder output from all 47 species
Msp_g05138	No alias	phosphatase *(PBCP) & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g05276	No alias	phosphatase *(PBCP) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g04619	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g105020.3.1	Solyc01g105020	Probable protein phosphatase 2C 71 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Solyc06g007350.4.1	Solyc06g007350	photosynthetic acclimation PBCP phosphatase	0.06	OrthoFinder output from all 47 species
Spa_g25213	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016822_P004	Zm00001e016822	photosynthetic acclimation PBCP phosphatase	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006470	protein dephosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	IMP	Interproscan
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0035970	peptidyl-threonine dephosphorylation	IDA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	IMP	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0005527	macrolide binding	IEP	HCCA
MF	GO:0005528	FK506 binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009443	pyridoxal 5'-phosphate salvage	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0010206	photosystem II repair	IEP	HCCA
BP	GO:0016050	vesicle organization	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0030091	protein repair	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042817	pyridoxal metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042821	pyridoxal biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0050236	pyridoxine:NADP 4-dehydrogenase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
MF	GO:0070402	NADPH binding	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G30170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation