AT2G28550 (RAP2.7, TOE1)

Aliases : RAP2.7, TOE1

Description : related to AP2.7

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28550

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	AIL5, EMK, CHO1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.08	OrthoFinder output from all 47 species
Adi_g018198	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Adi_g058146	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g067566	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04901	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g25494	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ala_g27522	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Als_g01822	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g32587	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21188	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21593	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.03	OrthoFinder output from all 47 species
Aob_g22039	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g28184	WRI1, ATWRI1, ASML1, WRI	RAM1-dependent transcription factor *(WRI5) & original...	0.02	OrthoFinder output from all 47 species
Aop_g40928	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08424.t1	WRI1, ATWRI1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene10462.t1	Aspi01Gene10462	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene20073.t1	PLT2, Aspi01Gene20073	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene21780.t1	BBM, Aspi01Gene21780	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene24152.t1	PLT2, Aspi01Gene24152	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38022.t1	Aspi01Gene38022	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene67586.t1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010452	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Cba_g13334	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Cba_g59950	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.03G029300.1	BBM, Ceric.03G029300	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G054600.1	ADAP, Ceric.03G054600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G056200.1	PLT2, Ceric.10G056200	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.1Z150100.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G003300.1	PLT2, Ceric.26G003300	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.32G008600.1	BBM, Ceric.32G008600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cre08.g385350	HRE1	No description available	0.02	OrthoFinder output from all 47 species
Dac_g07392	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dac_g16965	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dac_g22473	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g08905	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g12320	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g17762	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g31441	WRI1, ATWRI1, ASML1, WRI	RAM1-dependent transcription factor *(WRI5) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g33754	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g41387	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g47713	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dde_g19882	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g30317	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g42409	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g06863	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g17161	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g17996	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g18636	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g30529	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
Gb_18139	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Gb_33988	AP2, FLO2, FL1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os04g42570.1	PLT1, LOC_Os04g42570	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os06g43220.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os07g39110.2	LOC_Os07g39110	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os11g19060.1	BBM, LOC_Os11g19060	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Len_g08830	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g45546	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Len_g46832	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Len_g51118	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_10005612g0010	ADAP	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_196219g0010	AIL5, EMK, CHO1	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_2193g0020	AP2, FLO2, FL1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_30905g0010	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.08	OrthoFinder output from all 47 species
MA_8090186g0010	AP2, FLO2, FL1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_95471g0010	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Msp_g28024	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Msp_g31091	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Msp_g32091	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Msp_g35360	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Msp_g39406	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g09452	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g14049	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g25934	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g35194	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ore_g17459	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ore_g19237	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ore_g29244	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Ore_g35099	WRI1, ATWRI1, ASML1, WRI	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g17715	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Pir_g37453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Pir_g44006	RAP2.7, TOE1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pir_g44851	DRG, CKC, CKC1, ANT	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g21617	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g23616	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g59880	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000274	AP2, FLO2, FL1	not classified & original description: CDS=216-980	0.04	OrthoFinder output from all 47 species
Sam_g36453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Smo98831	AP2, FLO2, FL1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Solyc03g044300.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc03g117720.3.1	ADAP, Solyc03g117720	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g50963	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Tin_g10568	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005986	sucrose biosynthetic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006059	hexitol metabolic process	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0010411	xyloglucan metabolic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
BP	GO:0019401	alditol biosynthetic process	IEP	HCCA
BP	GO:0019406	hexitol biosynthetic process	IEP	HCCA
BP	GO:0019593	mannitol biosynthetic process	IEP	HCCA
BP	GO:0019594	mannitol metabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	IEP	HCCA
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	152	201

External Links

No external refs found!

AT2G28550 (RAP2.7, TOE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation