AT2G22770 (NAI1)

Aliases : NAI1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22770
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AT2G22750	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT2G22760	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
AT4G37850	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g047963	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01447	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13961	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G102500.1	Ceric.03G102500	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.08G068100.1	Ceric.08G068100	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g04159	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g12323	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01003697001	NAI1	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01003701001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.08	OrthoFinder output from all 47 species
GSVIVT01006588001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
GSVIVT01036959001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.09	OrthoFinder output from all 47 species
Gb_13728	No alias	transcription factor (bHLH). bHLH-IVa-class iron...	0.08	OrthoFinder output from all 47 species
LOC_Os03g12760.1	LOC_Os03g12760	transcription factor (bHLH). bHLH-IVa-class iron...	0.05	OrthoFinder output from all 47 species
LOC_Os03g46860.1	LOC_Os03g46860	transcription factor (bHLH). bHLH-IVa-class iron...	0.06	OrthoFinder output from all 47 species
LOC_Os03g51580.1	LOC_Os03g51580	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
LOC_Os12g43620.1	LOC_Os12g43620	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
Lfl_g20093	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g30933	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_142125g0020	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_149167g0010	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_4761g0020	No alias	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
MA_50811g0010	NAI1	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Msp_g03516	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g48784	NAI1	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g19302	AIB, ATAIB	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g17525	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12007	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g31815	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g106460.4.1	Solyc01g106460	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Solyc02g091800.4.1	Solyc02g091800	transcription factor (bHLH). bHLH-IVa-class iron...	0.06	OrthoFinder output from all 47 species
Solyc02g091810.2.1	Solyc02g091810	transcription factor (bHLH). bHLH-IVa-class iron...	0.09	OrthoFinder output from all 47 species
Solyc05g009640.4.1	Solyc05g009640	transcription factor (bHLH)	0.08	OrthoFinder output from all 47 species
Solyc06g064580.2.1	Solyc06g064580	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Tin_g00716	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g23333	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000935_P001	Zm00001e000935	transcription factor (bHLH). bHLH-IVa-class iron...	0.09	OrthoFinder output from all 47 species
Zm00001e002570_P001	Zm00001e002570	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e003313_P001	NAI1, Zm00001e003313	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
Zm00001e003314_P001	Zm00001e003314	transcription factor (bHLH). bHLH-IVa-class iron...	0.08	OrthoFinder output from all 47 species
Zm00001e005533_P001	Zm00001e005533	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
Zm00001e012122_P001	Zm00001e012122	transcription factor (bHLH). bHLH-IVa-class iron...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IMP	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007029	endoplasmic reticulum organization	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0002020	protease binding	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
CC	GO:0010168	ER body	IEP	HCCA
BP	GO:0010683	tricyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0015928	fucosidase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
BP	GO:0019759	glycosinolate catabolic process	IEP	HCCA
BP	GO:0019762	glucosinolate catabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0050898	nitrile metabolic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070417	cellular response to cold	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080003	thalianol metabolic process	IEP	HCCA
MF	GO:0080014	thalianol hydroxylase activity	IEP	HCCA
BP	GO:0080027	response to herbivore	IEP	HCCA
BP	GO:0080028	nitrile biosynthetic process	IEP	HCCA
BP	GO:0080119	ER body organization	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	132	178

External Links

No external refs found!

AT2G22770 (NAI1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation