AT2G22750

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22750
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AT2G22770	NAI1	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Aspi01Gene67830.t1	Aspi01Gene67830	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01004409001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
GSVIVT01036959001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
LOC_Os03g12760.1	LOC_Os03g12760	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
LOC_Os12g43620.1	LOC_Os12g43620	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
MA_4761g0020	No alias	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Msp_g48784	NAI1	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g091800.4.1	Solyc02g091800	transcription factor (bHLH). bHLH-IVa-class iron...	0.06	OrthoFinder output from all 47 species
Solyc06g064590.3.1	Solyc06g064590	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Tin_g00716	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g23333	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000935_P001	Zm00001e000935	transcription factor (bHLH). bHLH-IVa-class iron...	0.04	OrthoFinder output from all 47 species
Zm00001e003313_P001	NAI1, Zm00001e003313	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species
Zm00001e003314_P001	Zm00001e003314	transcription factor (bHLH). bHLH-IVa-class iron...	0.06	OrthoFinder output from all 47 species
Zm00001e012122_P001	Zm00001e012122	transcription factor (bHLH). bHLH-IVa-class iron...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000304	response to singlet oxygen	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0010263	tricyclic triterpenoid biosynthetic process	IEP	HCCA
BP	GO:0010683	tricyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0016104	triterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0018904	ether metabolic process	IEP	HCCA
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
CC	GO:0031012	extracellular matrix	IEP	HCCA
MF	GO:0031559	oxidosqualene cyclase activity	IEP	HCCA
MF	GO:0034075	arabidiol synthase activity	IEP	HCCA
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	HCCA
MF	GO:0042349	guiding stereospecific synthesis activity	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
BP	GO:0071453	cellular response to oxygen levels	IEP	HCCA
BP	GO:0071456	cellular response to hypoxia	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
BP	GO:1901503	ether biosynthetic process	IEP	HCCA
BP	GO:1901598	(-)-pinoresinol metabolic process	IEP	HCCA
BP	GO:1901599	(-)-pinoresinol biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	127	172

External Links

No external refs found!

AT2G22750

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation