AT2G20260 (PSAE-2)

Aliases : PSAE-2

Description : photosystem I subunit E-2

Gene families : OG0002928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002928_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G20260
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00131500	PSAE-1,...	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.18	OrthoFinder output from all 47 species
Adi_g024208	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.17	OrthoFinder output from all 47 species
Adi_g025743	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g41037	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Ala_g23025	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Als_g03364	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Als_g05876	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Aob_g13796	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Aob_g19373	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g38967	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09355	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g10172	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene58548.t1	PSAE-2, Aspi01Gene58548	component *(PsaE) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Azfi_s0067.g036151	PSAE-2	component *(PsaE) of PS-I complex & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0528.g075763	PSAE-2	component *(PsaE) of PS-I complex & original...	0.03	OrthoFinder output from all 47 species
Cba_g34861	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.02G048500.1	PSAE-2, Ceric.02G048500	component *(PsaE) of PS-I complex & original...	0.16	OrthoFinder output from all 47 species
Ceric.27G025300.1	PSAE-2, Ceric.27G025300	component *(PsaE) of PS-I complex & original...	0.12	OrthoFinder output from all 47 species
Cre10.g420350	No alias	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.23	OrthoFinder output from all 47 species
Dac_g00144	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g09167	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Dcu_g51505	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.23	OrthoFinder output from all 47 species
Dde_g21947	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Ehy_g00165	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16182	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01028481001	PSAE-2	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.16	OrthoFinder output from all 47 species
Gb_21826	PSAE-2	component PsaE of PS-I complex	0.12	OrthoFinder output from all 47 species
LOC_Os07g25430.1	PSAE-2, LOC_Os07g25430	component PsaE of PS-I complex	0.23	OrthoFinder output from all 47 species
Len_g12059	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Len_g13610	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Mp1g24020.1	PSAE-2	component PsaE of PS-I complex	0.22	OrthoFinder output from all 47 species
Msp_g05545	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11190	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g03988	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Nbi_g06885	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g09411	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g14800	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g14801	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g27702	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35945	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Pir_g17558	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Pnu_g06145	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c23_22230V3.1	PSAE-1, Pp3c23_22230	photosystem I subunit E-2	0.09	OrthoFinder output from all 47 species
Pp3c24_20960V3.1	Pp3c24_20960	photosystem I subunit E-2	0.09	OrthoFinder output from all 47 species
Ppi_g10417	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g18393	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016679	PSAE-2	component *(PsaE) of PS-I complex & original...	0.09	OrthoFinder output from all 47 species
Sam_g07723	No alias	component *(PsaE) of PS-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g083680.3.1	PSAE-2, Solyc06g083680	component PsaE of PS-I complex	0.21	OrthoFinder output from all 47 species
Solyc09g063130.3.1	PSAE-2, Solyc09g063130	component PsaE of PS-I complex	0.15	OrthoFinder output from all 47 species
Spa_g15957	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g21652	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Tin_g03737	PSAE-2	component *(PsaE) of PS-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g08050	PSAE-1	component *(PsaE) of PS-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Zm00001e009565_P001	PSAE-2, Zm00001e009565	component PsaE of PS-I complex	0.17	OrthoFinder output from all 47 species
Zm00001e033381_P001	PSAE-2, Zm00001e033381	component PsaE of PS-I complex	0.19	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009538	photosystem I reaction center	ISS	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0010287	plastoglobule	IDA	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006568	tryptophan metabolic process	IEP	HCCA
BP	GO:0006569	tryptophan catabolic process	IEP	HCCA
BP	GO:0006586	indolalkylamine metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
CC	GO:0009782	photosystem I antenna complex	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010270	photosystem II oxygen evolving complex assembly	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0030076	light-harvesting complex	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042436	indole-containing compound catabolic process	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0043086	negative regulation of catalytic activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003375	PSI_PsaE	85	144

External Links

No external refs found!

AT2G20260 (PSAE-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation