AT2G20190 (ATCLASP, CLASP)


Aliases : ATCLASP, CLASP

Description : CLIP-associated protein


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G20190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00148640 ATCLASP, CLASP,... Cell cycle.cytokinesis.preprophase microtubule... 0.02 OrthoFinder output from all 47 species
Adi_g105480 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02715 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g15316 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00540.t1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011308 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005876 spindle microtubule IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005938 cell cortex IDA Interproscan
BP GO:0007026 negative regulation of microtubule depolymerization IMP Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009524 phragmoplast IDA Interproscan
BP GO:0009825 multidimensional cell growth RCA Interproscan
BP GO:0009832 plant-type cell wall biogenesis RCA Interproscan
BP GO:0009932 cell tip growth RCA Interproscan
BP GO:0010817 regulation of hormone levels RCA Interproscan
BP GO:0016049 cell growth IMP Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0030243 cellulose metabolic process RCA Interproscan
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Interproscan
BP GO:0043622 cortical microtubule organization IDA Interproscan
BP GO:0043622 cortical microtubule organization IMP Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0050821 protein stabilization IMP Interproscan
MF GO:0051010 microtubule plus-end binding IDA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 284 500
IPR024395 CLASP_N_dom 794 991
IPR000357 HEAT 160 186
No external refs found!