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  5. AT2G19770

AT2G19770 (PRF5)


Aliases : PRF5

Description : profilin 5


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G19770

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00159630 PFN3, PRF3,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Adi_g124094 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62552 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g38069 PRF4 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08776 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10375 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g52365 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00382 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g17660.1 PRF5, LOC_Os10g17660 profilin actin nucleation protein 0.06 OrthoFinder output from all 47 species
LOC_Os10g17680.1 PRF5, LOC_Os10g17680 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
MA_534242g0010 PFN3, PRF3 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Msp_g00126 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05123 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36146 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22089 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52925 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23810 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06915 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24067 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g044630.2.1 PRF4, Solyc12g044630 profilin actin nucleation protein 0.09 OrthoFinder output from all 47 species
Spa_g09253 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25576 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027449_P001 PRF4, Zm00001e027449 profilin actin nucleation protein 0.07 OrthoFinder output from all 47 species
Zm00001e029080_P001 PRF4, Zm00001e029080 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Zm00001e029081_P001 PRF5, Zm00001e029081 profilin actin nucleation protein 0.04 OrthoFinder output from all 47 species
Zm00001e032207_P001 PRF4, Zm00001e032207 profilin actin nucleation protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISS Interproscan
MF GO:0003785 actin monomer binding TAS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007010 cytoskeleton organization ISS Interproscan
BP GO:0007015 actin filament organization RCA Interproscan
CC GO:0009524 phragmoplast IDA Interproscan
CC GO:0015629 actin cytoskeleton ISS Interproscan
BP GO:0030036 actin cytoskeleton organization TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005884 actin filament IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0070382 exocytic vesicle IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 1 133
No external refs found!