AT2G16500 (ADC1, ARGDC, ARGDC1, SPE1)

Aliases : ADC1, ARGDC, ARGDC1, SPE1

Description : arginine decarboxylase 1

Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G16500

Target	Alias	Description	ECC score	Gene Family Method
Aop_g11907	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene41543.t1	ADC2, SPE2,...	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene57606.t1	ADC2, SPE2,...	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0002.g001110	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: CDS=1-2103	0.03	OrthoFinder output from all 47 species
Azfi_s0073.g037089	ADC1, ARGDC, ARGDC1, SPE1	EC_4.1 carbon-carbon lyase & original description: CDS=1-1959	0.03	OrthoFinder output from all 47 species
Ceric.1Z147000.1	ADC2, SPE2,...	EC_4.1 carbon-carbon lyase & original description:...	0.06	OrthoFinder output from all 47 species
Dac_g08893	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04009	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os04g01690.3	ADC1, ARGDC,...	arginine decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g12872	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18161	ADC1, ARGDC, ARGDC1, SPE1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33380	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35230	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g58596	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g25136	ADC1, ARGDC, ARGDC1, SPE1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17386	ADC2, SPE2, ATADC2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Solyc10g054440.3.1	ADC2, SPE2,...	arginine decarboxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008792	arginine decarboxylase activity	NAS	Interproscan
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IMP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0048316	seed development	IGI	Interproscan
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004042	acetyl-CoA:L-glutamate N-acetyltransferase activity	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006525	arginine metabolic process	IEP	HCCA
BP	GO:0006526	arginine biosynthetic process	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022644	De-COase2_N	128	381

External Links

No external refs found!

AT2G16500 (ADC1, ARGDC, ARGDC1, SPE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation