AT2G02480 (STI)

Aliases : STI

Description : AAA-type ATPase family protein

Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02480

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00130p00061410	evm_27.TU.AmTr_v1...	Protein STICHEL-like 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cba_g14582	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g37887	STI	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29197	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021264001	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os12g19180.1	LOC_Os12g19180	Protein STICHEL-like 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10436743g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp1g13040.1	STI	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Ppi_g11006	STI	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29404	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50893	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g102810.3.1	STI, Solyc01g102810	Protein STICHEL OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc02g072090.2.1	Solyc02g072090	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Zm00001e019639_P005	STI, Zm00001e019639	Protein STICHEL OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Zm00001e019906_P002	Zm00001e019906	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e028231_P002	Zm00001e028231	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e032180_P001	Zm00001e032180	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003002	regionalization	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010026	trichome differentiation	IMP	Interproscan
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010091	trichome branching	IMP	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	RCA	Interproscan
BP	GO:0010638	positive regulation of organelle organization	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016926	protein desumoylation	RCA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033043	regulation of organelle organization	RCA	Interproscan
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0048449	floral organ formation	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050665	hydrogen peroxide biosynthetic process	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903409	reactive oxygen species biosynthetic process	None	Extended
BP	GO:1905393	plant organ formation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005881	cytoplasmic microtubule	IEP	HCCA
BP	GO:0006349	regulation of gene expression by genomic imprinting	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009292	horizontal gene transfer	IEP	HCCA
BP	GO:0009294	DNA-mediated transformation	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
CC	GO:0010005	cortical microtubule, transverse to long axis	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010364	regulation of ethylene biosynthetic process	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0031335	regulation of sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0042762	regulation of sulfur metabolic process	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0045857	obsolete negative regulation of molecular function, epigenetic	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
CC	GO:0055028	cortical microtubule	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1900908	regulation of olefin metabolic process	IEP	HCCA
BP	GO:1900911	regulation of olefin biosynthetic process	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022754	DNA_pol_III_gamma-3	679	740

External Links

No external refs found!

AT2G02480 (STI)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation