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  5. AT1G79430

AT1G79430 (APL, WDY)


Aliases : APL, WDY

Description : Homeodomain-like superfamily protein


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G79430
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
AMTR_s00048p00192390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT4G04605 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g077902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09355 No alias transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22830 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04353 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22007 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene18702.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0121.g046895 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0481.g073115 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g15907 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g24534 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g37355 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G040100.1 Ceric.22G040100 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g43661 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11678 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11696 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04486 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g14665 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15807 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21996 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01001376001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.12 OrthoFinder output from all 47 species
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036717001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.1 OrthoFinder output from all 47 species
Gb_05469 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_13931 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_41007 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g04640.1 LOC_Os02g04640 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g07170.1 LOC_Os02g07170 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g07770.1 APL, WDY, LOC_Os02g07770 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g20900.1 LOC_Os03g20900 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g51130.1 LOC_Os04g51130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45410.1 APL, WDY, LOC_Os06g45410 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g48596.1 LOC_Os07g48596 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g15893 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08455 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40548 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_138039g0010 KAN2 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_181986g0010 ATMYR1, MYR1 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
MA_218023g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g31008 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Nbi_g12418 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24259 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03482 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13957 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18043 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03399 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g29411 PHL1 transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06354 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g41633 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g27536 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo414222 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Solyc04g079600.3.1 KAN4, ATS, Solyc04g079600 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g083340.3.1 Solyc10g083340 G2-like GARP transcription factor 0.11 OrthoFinder output from all 47 species
Solyc10g085620.2.1 Solyc10g085620 G2-like GARP transcription factor 0.12 OrthoFinder output from all 47 species
Solyc12g017370.3.1 APL, WDY, Solyc12g017370 G2-like GARP transcription factor 0.13 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22307 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g24824 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g39146 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g57297 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g30879 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
BP GO:0010088 phloem development IMP Interproscan
BP GO:0010089 xylem development IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005242 inward rectifier potassium channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008506 sucrose:proton symporter activity IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009636 response to toxic substance IEP HCCA
MF GO:0009669 sucrose:monoatomic cation symporter activity IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009915 phloem sucrose loading IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010188 response to microbial phytotoxin IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0015766 disaccharide transport IEP HCCA
BP GO:0015770 sucrose transport IEP HCCA
BP GO:0015772 oligosaccharide transport IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042762 regulation of sulfur metabolic process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
MF GO:0043394 proteoglycan binding IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0055078 sodium ion homeostasis IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0099094 ligand-gated monoatomic cation channel activity IEP HCCA
BP GO:0110126 phloem loading IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 65 104
No external refs found!