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AT1G76810


Description : eukaryotic translation initiation factor 2 (eIF-2) family protein


Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G76810
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Adi_g012011 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
Ehy_g14997 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species
GSVIVT01034895001 No alias Protein biosynthesis.translation initiation.eIF5B... 0.04 OrthoFinder output from all 47 species
Gb_28583 No alias Met-tRNA positioning component eIF5B of initiator tRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os12g31880.1 LOC_Os12g31880 Met-tRNA positioning component eIF5B of initiator tRNA... 0.04 OrthoFinder output from all 47 species
Mp4g09260.1 No alias Met-tRNA positioning component eIF5B of initiator tRNA... 0.04 OrthoFinder output from all 47 species
Ore_g16364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33223 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.06 OrthoFinder output from all 47 species
Smo166557 No alias Protein biosynthesis.translation initiation.eIF5B... 0.03 OrthoFinder output from all 47 species
Solyc03g058390.2.1 Solyc03g058390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g12989 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species
Zm00001e026670_P001 Zm00001e026670 Met-tRNA positioning component eIF5B of initiator tRNA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0008135 translation factor activity, RNA binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004839 ubiquitin activating enzyme activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098754 detoxification IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 942 1019
IPR000795 T_Tr_GTP-bd_dom 707 915
IPR023115 TIF_IF2_dom3 1045 1143
No external refs found!